boninens. It might represent novel species or even new genera. Primary screening of taxol-producing fungi based on molecular marker Molecular marker based screening is a rapid and efficient alternative to find taxol-producing endophytic microbes in contrast to the traditional screening method [11, 17]. This method is not dependent on the production of paclitaxel and can indicate the presence of some required genes for taxol biosynthesis in the microbial genome. In yew trees, taxol biosynthesis involves 19 enzymatic steps from the universal diterpenoid precursor geranylgeranyl diphosphate (GGPP) by the plastidial methyl erythritol phosphate pathway . We thus chose ts (involved in formation
of the taxane skeleton), dbat (involved in baccatin III formation), Dinaciclib cell line and bapt (involved in phenylpropanoyl side chain formation at C13), three key genes in taxol biosynthesis, as a primary screening to identify
taxol-producing fungi. All 11 fungal isolates with distinctive genotype separated from T. media were consecutively screened for the presence of ts, dbat, and bapt genes. Three fungi (strains HAA11, HBA29, and TA67) had positive hits of ts and dbat. The ts and dbat genes are essential for taxol biosynthesis but not diagnostic because taxol precursor baccatin III producers also have ts and dbat. Thus, the 3 fungi were screened for the presence of bapt. Interestingly, all these 3 fungi had approximately 530 bp fragments of bapt gene (Figure 5), suggesting that all of them may produce taxol. Currently, only ts, dbat, and bapt genes selleck have been used as molecular probes for the primary screening of taxol producing microorganisms [16, 17], thus designing suitable degenerate Epacadostat research buy primers for amplification of more target genes, e.g., the final acylation step in taxol biosynthesis, taxoid C13-side-chain N-benzoyltransferase (DBTNBT), may be a better option
for screening. Figure 5 PCR analysis for the presence of bapt in endophytic fungi from T. media . Ladder M: DS2000 DNA marker (Dongsheng Biotech Ltd, China); Lane 1–3, the PCR product of strains HAA11, HBA29, and TA67. Identification of fungal taxol We screened the extracts of the 3 representative species Guignardia mangiferae HAA11, Fusarium proliferatum HBA29, and Colletotrichum gloeosporioides TA67 with positive results in the primary Chloroambucil screening to detect fungal taxol by high performance liquid chromatography-mass spectrometry (LC-MS). The HPLC peak positions and peak shapes of the 3 representative species from the different genera were identical to that of standard taxol (retention time = 21.02±0.03 min), indicating the 3 distinct fungi may produce taxol. Further convincing evidence for the identity of the fungal taxol was obtained by high resolution MS (Figure 6). Characteristically, the authentic taxol yielded an [M-H]- peak at m/z 852.32 and an [M+COOH]- peak at m/z 898.32.